OptiStims

Placeholder

This repository is a placeholder. The pipeline described below is documented here so the ecosystem has a single home for it; the code still lives across simnibs-modular, simnibs-reader and simnibs-analyze.

End-to-end automated pipeline for stroke lesion-aware tDCS simulation and analysis.

---

⚡️ Automated Stroke Pipeline

From raw MRI to cohort-level e-field statistics and figures, with lesion-aware head modelling throughout.

---

Ecosystem

• SimNIBS

  ---

  The core simulation platform for non-invasive brain stimulation.

  Documentation

• simnibs-modular

  ---

  Modular pipeline components for SimNIBS workflows.

  GitHub Pages · Repo

• simnibs-reader

  ---

  Structured access to SimNIBS output trees, ROIs and statistics.

  GitHub Pages · Repo

• simnibs-analyze

  ---

  Statistical analysis tools for SimNIBS outputs.

  GitHub Pages · Repo